Library Name
Library ID: 10516Name: Paired ends GM12878rep2_500bp_amicon
Affiliations:
- Brian Williams ( Barbara Wold )
- ENCODE ( )
- ENCODE_Tier1 ( )
Sample Details
Species: Homo sapiensExperiment Type: RNA-seq
Background or Cell Line: GM12878
Condition: Unknown
Replicate: 2
Library Details
Library Type: Paired End (non-multiplexed)Multiplex Index:
Creation Date Nov. 10, 2008
Made By: Brian Williams
Gel Cut Size: 500
Insert Size: 400
Concentration: 38.80 ng/µl
Protocol Stopping Point Ligation, gel, then 18x PCR
Raw Result Files
| Run Start Date | Cycle | Flowcell | Lane | Summary | Eland | Bed | Archived |
| No data | |||||||
Lane Summary Statistics
| No Match | QC Failed | Unique | Repeat | ||||||||||||||||
| Cycles | Flowcell | Lane | End | Cluster / Tile | pM | Raw Reads | total | % | total | % | 0 mismatch | 1 mismatch | 2 mismatch | Total | 0 mismatch | 1 mismatch | 2 mismatch | Total | |
| No data | |||||||||||||||||||
Flowcell Notes
| Flowcell ID | Lane | Comment | Lane Status |
| ilmn200901 | 5 | None | |
| ilmn200901 | 6 | None | |
| 30HGGAAXX | 5 | Flowcell only ran for 45 bp | Failed |
| 30HGGAAXX | 6 | Flowcell only ran for 45 bp | Failed |
| 30CUUAAXX | 6 | Lost registration, effectively became 2 1x75 runs. Was not included in ENCODE submission | Failed |
| 30CUUAAXX | 7 | Lost registration, effectively became 2 1x75 runs. Was not included in ENCODE submission | Failed |
| 30DY0AAXX | 6 | None |