Library Name
Library ID: 10515Name: Paired ends GM12878rep2_300bp_amicon
Affiliations:
- Brian Williams ( Barbara Wold )
- ENCODE ( )
- ENCODE_Tier1 ( )
Sample Details
Species: Homo sapiensExperiment Type: RNA-seq
Background or Cell Line: GM12878
Condition: Unknown
Replicate: 2
Library Details
Library Type: Paired End (non-multiplexed)Multiplex Index:
Creation Date Nov. 10, 2008
Made By: Brian Williams
Gel Cut Size: 300
Insert Size: 200
Concentration: 18.60 ng/µl
Protocol Stopping Point Ligation, gel, then 18x PCR
Raw Result Files
| Run Start Date | Cycle | Flowcell | Lane | Summary | Eland | Bed | Archived |
| No data | |||||||
Lane Summary Statistics
| No Match | QC Failed | Unique | Repeat | ||||||||||||||||
| Cycles | Flowcell | Lane | End | Cluster / Tile | pM | Raw Reads | total | % | total | % | 0 mismatch | 1 mismatch | 2 mismatch | Total | 0 mismatch | 1 mismatch | 2 mismatch | Total | |
| No data | |||||||||||||||||||
Flowcell Notes
| Flowcell ID | Lane | Comment | Lane Status |
| 61PKHAAXX | 1 | ||
| 61PKHAAXX | 2 | ||
| 616L7AAXX | 1 | ||
| ilmn200901 | 4 | None | |
| 30HGGAAXX | 4 | Flowcell only ran for 45 bp | Failed |
| 30CUUAAXX | 8 | Lost registration, effectively became 2 1x75 runs. Was not included in ENCODE submission | Failed |
| 30DY0AAXX | 7 | None | |
| 30DY0AAXX | 8 | None |