Library Name

Library ID: 10516
Name: Paired ends GM12878rep2_500bp_amicon
Affiliations:
  • Brian Williams ( Barbara Wold )
  • ENCODE ( )
  • ENCODE_Tier1 ( )
Accessions:

Sample Details

Species: Homo sapiens
Experiment Type: RNA-seq
Background or Cell Line: GM12878
Condition: Unknown
Replicate: 2

Library Details

Library Type: Paired End (non-multiplexed)
Multiplex Index:
Creation Date Nov. 10, 2008
Made By: Brian Williams
Gel Cut Size: 500
Insert Size: 400
Concentration: 38.80 ng/µl
Protocol Stopping Point Ligation, gel, then 18x PCR

Raw Result Files

Run Start Date Cycle Flowcell Lane Summary Eland Bed Archived
No data

Lane Summary Statistics

No Match QC Failed Unique Repeat
Cycles Flowcell Lane End Cluster / Tile pM Raw Reads total % total % 0 mismatch 1 mismatch 2 mismatch Total 0 mismatch 1 mismatch 2 mismatch Total
No data

Flowcell Notes

Flowcell ID Lane Comment Lane Status
ilmn200901 5 None
ilmn200901 6 None
30HGGAAXX 5 Flowcell only ran for 45 bp Failed
30HGGAAXX 6 Flowcell only ran for 45 bp Failed
30CUUAAXX 6 Lost registration, effectively became 2 1x75 runs. Was not included in ENCODE submission Failed
30CUUAAXX 7 Lost registration, effectively became 2 1x75 runs. Was not included in ENCODE submission Failed
30DY0AAXX 6 None


Count of multi-reads